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Pseudomonas syringae pv. actinidae resources

genome resources
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McCann et al, 2013
. Genomic analysis of the Kiwifruit Pathogen Pseudomonas syringae pv. actinidae Proves Insight into the Origins of an Emergent Plant Disease. PLOS Pathogens 9(7): e1003503.

Pseudomonas syringae pv. actinidae files for genome viewing:

For easy viewing of P. syringae pv. actinidae draft genomes sequenced by McCann et al, 2013, pseudomolecules have been generated with contigs connected by the TIGR linker. Annotations for the pseudomolecules are provided in .gff format. These and other files can be viewed using the Artemis Genome Viewer

P. syringae actinidae strain J-35

chromosome sequence (pseudomolecule)
chromosome annotation (.gff)

plasmid sequence
plasmid annotation (.gff)

P. syringae actinidae strain NV V-13

chromosome sequence (pseudomolecule)
chromosome annotation (.gff)

plasmid seqeunce
plasmid annotation (.gff)

P. syringae actinidae strain LV-5

chromosome sequence (series of scaffolds, not joined into a pseudomolecule)
chromosome annotation (.gff)



Magdalen Lindeberg
PPI Project Coordinator
Plant Pathology and Plant-Microbe Biology
Cornell University
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