FT source 1..5928787
FT /organism="Pseudomonas syringae pv. phaseolicola 1448A"
FT /mol_type="genomic DNA"
FT /strain="1448A; BAA-978"
FT /db_xref="ATCC:BAA-978"
FT /db_xref="taxon:264730"
FT /note="pathovar: phaseolicola"
FT promoter complement(155095..155127)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(204736..204768)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(205627..205659)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter 206836..206868
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 207821..207853
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(334205..334237)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 523477..523509
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(526485..526517)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(674946..674978)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(698397..698429)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 758876..758908
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 814671..814703
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 881865..881897
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(894229..894261)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(895270..895302)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(899010..899042)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(929966..929998)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(993116..993148)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(1308551..1308583)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(1355343..1355375)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 1471266..1471298
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(1474302..1474334)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter 1474396..1474428
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(1482937..1482969)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter 1483036..1483068
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302) and DFI screening
FT (PMID: 15701698)"
FT promoter 1487533..1487565
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302) and DFI screening
FT (PMID: 15701698)"
FT promoter 1491409..1491441
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(1499719..1499751)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(1505445..1505477)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter 1506230..1506262
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302) and DFI screening
FT (PMID: 15701698)"
FT promoter complement(1598990..1599022)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(1653704..1653736)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter 1684915..1684947
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter 1765916..1765948
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302)"
FT promoter complement(1782948..1782980)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302)"
FT promoter complement(1959565..1959597)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(2043278..2043310)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 2156269..2156301
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302)"
FT promoter complement(2499819..2499851)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(2559315..2559347)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 2661040..2661072
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 2666862..2666894
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(2727616..2727648)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(2807786..2807818)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(2837846..2837878)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(2884930..2884962)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(3019958..3019990)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 3163976..3164008
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 3281700..3281732
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 3384443..3384475
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(3489945..3489977)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 3515322..3515354
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302) and DFI screening
FT (PMID: 15701698)"
FT promoter 3683206..3683238
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 3766603..3766635
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(4040697..4040729)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter complement(4049230..4049262)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(4052873..4052905)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(4054257..4054289)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 4086699..4086731
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 4250956..4250988
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 4275678..4275710
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(4312113..4312145)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302) and DFI screening
FT (PMID: 15701698)"
FT promoter 4376400..4376432
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 4481710..4481742
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 4521720..4521752
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(4623704..4623736)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(4905423..4905455)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(4908733..4908765)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(4946734..4946766)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302)"
FT promoter complement(4989695..4989727)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter 5087199..5087231
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(5090374..5090406)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 5102609..5102641
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 5171264..5171296
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 5205008..5205040
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 5258356..5258388
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 5375742..5375774
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="RT-PCR (PMID: 17073302)"
FT promoter complement(5393300..5393332)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(5420788..5420820)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(5515328..5515360)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter 5609315..5609347
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(5627857..5627889)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"
FT promoter complement(5661694..5661726)
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans; downstream gene(s) exhibit HrpL-dependent
FT differential expression"
FT /experiment="DFI screening (PMID: 15701698)"
FT promoter 5863179..5863211
FT /note="hrp box; putative HrpL-dependent promoter; location
FT identified by hidden Markov model and/or weight matrix
FT scans (PMID: 17073302)"