Updates to the Psp 1448A p1448A-A sequence and annotation:

Locus Date: Nature of change Source
 

12-8-06: 16 promoter features added (view list of all promoters in tabular form)
(Feature properties based on data presented in PMID: 17073302 and PMID: 15701698)

Format for those promoters identified solely by bioinformatic approaches:

/note="hrp box; putative HrpL-dependent promoter; location identified by hidden Markov model and/or weight matrix scans (PMID: 17073302)”

Format for those promoters with experimental confirmation:

/note="hrp box; putative HrpL-dependent promoter; location identified by hidden Markov model and/or weight matrix scans; downstream gene(s) exhibit HrpL-dependent diffential expression”
/experiment="RT-PCR (PMID: 17073302) and DFI screening (PMID: 15701698)"

(note that some /experiment fields are RT-PCR (PMID: 17073302) or DFI screening (PMID: 15701698) only)

M. Lindeberg,
Cornell University
(see literature cited)
PSPPH_A0122 12-8-06: Coordinates corrected
Coordinates for hopAW1 changed from complement(104814..105470) to complement(104814..105476) . Translated product adjusted accordingly 		John Stavrinides,
University of Toronto
PSPPH_A0056 12-8-06: Coordinates corrected
Coordinates for hopAV1 changed from 45673..48066 to 45646..48066 . Translated product adjusted accordingly 		John Stavrinides,
University of Toronto
all loci 11-05: change in locus tag format
Locus tag format for all loci has been changed from PSPTO#### to PSPTO_####		 Genbank
PSPPHA0007 9-05: Functional assignment and coordinates
Coordinates changed from "5092..5208" to "complement(5062..5352)". Product name changed from "hypothetical protein" to "carbon storage regulator related".

D. Schneider,
USDA-ARS
PSPPHA0073 9-05: Functional assignment and coordionates
Coordinates changed from "61862..61978" to complement(61832..62122)".
Product name changed from "hypothetical protein" to "carbon storage regulator related".

D. Schneider,
USDA-ARS