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Psy B728a - Genome Project Home Page


B728a home

project background

about Psy B728a

genome properties

tools for genome

Hop database & nomenclature

ongoing annotation

related links

site map


Pseudomonas syringae pv. syringae is the cause of brown spot on bean and represents an important model in molecular plant pathology. Sequencing and annotation of the 6.09 megabase genome was completed by The Department of Energy Joint Genome Institute (DOE-JGI) in 5/05.

Key to the main menu:

project background - information about project history, objectives, and investigators

about Psy B728a - description of Pseudomonas syringae pv.syringae B728a and its pathogenic properties

genome properties - properties of the genome as described in Feil, et al including links to analyses performed using the original sequence and annotation

tools for genome analysis - links for searching, BLAST analyses, and visualization using the Artemis genome viewer.

Hop database and nomenclature - database of Hop effector proteins, guides to implementation of the newly proposed Hop nomenclature, and a guide to terminology related to Type III secretion

ongoing annotation - view recent updates and submit changes to the B728a sequence/annotation

related links - links to additional genome pages, journals, and databases