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P. syringae Annotation Updates

genome resources
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Annotation updates logs reflect changes submitted to Genbank (see individual log files for dates of most recent changes). Note that FTP

Pto DC3000
Psy B728a
Psp 1448A

complete annotation records
(Genbank FTP site)

large plasmid - pDC3000A
small plasmid - pDC3000B

annotation updates logs

Read about the Gene Ontology Annotation (GOA) Project for plant-associated microbes (here)

NEW 10-15-11: Tabular files corresponding to re-annotation of transposable sequences in P. syringae pv phaseolicola 1448A (PMID: 22016774)
Pph_1448A_mobile_elmts_CP000058.tab, Pph_p1448A-A_mobile_elmts_CP000059.tab, Pph_p1448A-B_mobile_elmts_CP000060.tab

NOTE: As of 12/06, extragenic features such as experimentally confirmed and predicted hrp promoter sequences are being added to the Genbank annotation. Tabular listings of the hrp promoters can be viewed for each of the three P. syringae strains:
Pto DC3000 hrp promoters, Psp 1448A hrp promoters, Psy B728a hrp promoters

Communicating new updates:

Your input is welcome!
Report any errors and suggested corrections in the P. syringae sequences and annotation records to the PPI site administrator



Magdalen Lindeberg
PPI Project Coordinator
Plant Pathology and Plant-Microbe Biology
Cornell University