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Pseudomonas syringae Genome Resources Home Page
Pseudomonas syringae is a Gram negative, plant-pathogenic bacterium, strains of which are noted for their diverse and host-specific interactions with different plant species. Specific strains are assigned to one of the over 50 known pathovars based on their ability to infect different plant species. This site is a portal to genome biology resources for sequenced P. syringae strains

Pathovar
Strain
DiseaseHostsPrimary ContactSequencer Status
(link to NCBI)
ongoing curation
tomato bacterial speck tomato, Arabidopsis
Alan Collmer TIGR closed intensive
syringae brown spot bean Steven Lindow JGI closed occasional
phaseolicola halo blight bean John Mansfield TIGR closed occasional
tomato
bacterial speck tomato Boris Vinatzer VBI 122 contig draft minimal
tabaci
ATCC11528
wildfire tobacco David Studholme Sainsbury 134 contig draft annotation pending
aesculi 2250 canker horse chestnut David Studholme Sainsbury 776 contig draft annotation pending
aesculi NCPPB3681 non-pathogenic Indian horse chestnut David Studholme Sainsbury 841 contig draft annotation pending
oryzae
1_6
- rice Jeff Dangl UNC-CH 2855 contig draft annotation pending
syringae
FF5
- - David Studholme Sainsbury 4578 contig draft annotation pending
P. syringae genomes in process (registered at NCBI)

Quick Links

What's new on this site
See list of recent updates to the structure, tools and databases on this site

Revised Hop database The Hop database has been divided into three separate Excel files to better distinguish validated Hop families, validated helpers, and Hops/helpers discontinued since their original naming. Links to the new lists can be found in the Quick Links section above.

Annotating a new P. syringae genome? Contact the PPI site administrator with questions about annotation of Type III effectors and helpers to avoid perpetuating poor annotations in public databases
A model of P. syringae-host interactions based upon comprehensive Gene Ontology annotation of Hop effector proteins has been generated. See Modeling host-pathogen interactions with Gene Ontology Annotation
join the P. syringae registry
Benefits of registration: receive email updates of new features on this site
Mark your calendar for the 8th International Conference on Pseudomonas syringae pathovars and related pathogens
(Aug 31-Sept 3, 2010 in Oxford UK)

7th ICPSPRP meeting in Agadir, Morocco, November 2006 Report and photos
SEE THE DISEASE
Photos of bacterial speck, upstate NY, August, 2009 (ppt) photo credits: Chris Smart, NYSAES, Cornell Univ
Pseudomonas syringae at IPM Images 


Magdalen Lindeberg
PPI Project Coordinator
Dept Plant Pathology
Cornell University
contact

Pto DC3000 re-annotation proposal

coordinator teaching materials

Support for this site is currently provided by DBI-0605059

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